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中国科学院生态环境研究中心
KMS of Research Center for Eco-Environmental Sciences, CAS
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中国科学院环境生物... [11]
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Deng, Ye [8]
Wu, Yueni [8]
Feng, Kai [6]
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DARHD: A sequence database for aromatic ring-hydroxylating dioxygenase analysis and primer evaluation
期刊论文
JOURNAL OF HAZARDOUS MATERIALS, 2022, 卷号: 436, 期号: 0, 页码: 129230
Authors:
Li, Shuzhen
;
Shen, Wenli
;
Lian, Shengyang
;
Wu, Yueni
;
Qu, Yuanyuan
;
Deng, Ye
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Submit date:2022/11/09
HORIZONTAL TRANSFER
HYDROCARBONS PAHS
GENES
DEGRADATION
NAPHTHALENE
DIVERSITY
SEDIMENTS
BACTERIA
SOIL
QUANTIFICATION
Sampling cores and sequencing depths affected the measurement of microbial diversity in soil quadrats
期刊论文
SCIENCE OF THE TOTAL ENVIRONMENT, 2021, 卷号: 767, 页码: -
Authors:
Li, Shuzhen
;
Deng, Ye
;
Du, Xiongfeng
;
Feng, Kai
;
Wu, Yueni
;
He, Qing
;
Wang, Zhujun
;
Liu, Yangying
;
Wang, Danrui
;
Peng, Xi
;
Zhang, Zhaojing
;
Escalas, Arthur
;
Qu, Yuanyuan
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Submit date:2021/12/23
Sampling strategy
alpha diversity
Pooling
Biological replicate
Common species
Hill number
ARDEP, a Rapid Degenerate Primer Design Pipeline Based onk-mers for Amplicon Microbiome Studies
期刊论文
INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH, 2020, 卷号: 17, 期号: 16, 页码: 1-9
Authors:
Wu, Yueni
;
Feng, Kai
;
Wei, Ziyan
;
Wang, Zhujun
;
Deng, Ye
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Submit date:2021/09/15
bioinformatic program
primer design
k-mer
analysis platform
primer assessment
农牧交错带草地土壤剖面微生物总量、多样性和互作网络的垂直分布特征
期刊论文
微生物学通报, 2020, 卷号: 47, 期号: 09, 页码: 2789-2806
Authors:
杜雄峰
;
厉舒祯
;
冯凯
;
何晴
;
王朱珺
;
吴悦妮
;
王丹蕊
;
彭玺
;
王尚
;
邓晔
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Submit date:2021/07/16
农牧交错带
草地
原核微生物
多样性
分子生态网络
土壤深度
16S/18S/ITS扩增子高通量测序引物的生物信息学评估和改进
期刊论文
微生物学通报, 2020, 卷号: 47, 期号: 09, 页码: 2897-2912
Authors:
吴悦妮
;
冯凯
;
厉舒祯
;
王朱珺
;
张照婧
;
邓晔
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Submit date:2021/07/16
扩增子测序
16S rRNA基因
ITS基因
18S rRNA基因
PCR扩增
引物
引物覆盖度
引物特异性
扩增产物片段长度
Niche width of above- and below-ground organisms varied in predicting biodiversity profiling along a latitudinal gradient
期刊论文
MOLECULAR ECOLOGY, 2020, 卷号: 29, 期号: 10, 页码: 1890-1902
Authors:
Feng, Kai
;
Wang, Shang
;
Wei, Ziyan
;
Wang, Zhujun
;
Zhang, Zhaojing
;
Wu, Yueni
;
Zhang, Yuguang
;
Deng, Ye
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Submit date:2021/09/15
above- and below-ground ecology
biodiversity profiling
biogeographical distribution
forest ecosystem
niche width model
plants and microbes
Steeper spatial scaling patterns of subsoil microbiota are shaped by deterministic assembly process
期刊论文
MOLECULAR ECOLOGY, 2020, 卷号: 30, 期号: 4, 页码: 1072-1085
Authors:
Du, Xiongfeng
;
Deng, Ye
;
Li, Shuzhen
;
Escalas, Arthur
;
Feng, Kai
;
He, Qing
;
Wang, Zhujun
;
Wu, Yueni
;
Wang, Danrui
;
Peng, Xi
;
Wang, Shang
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Submit date:2021/09/15
assembly mechanism
biodiversity
biogeography
grassland
prokaryote
spatial scaling
Application of organic fertilizer improves microbial community diversity and alters microbial network structure in tea (Camellia sinensis) plantation soils
期刊论文
SOIL & TILLAGE RESEARCH, 2019, 卷号: 195, 页码: -
Authors:
Gu, Songsong
;
Hu, Qiulong
;
Cheng, Yuqi
;
Bai, Lianyang
;
Liu, Zhonghua
;
Xiao, Wenjun
;
Gong, Zhihua
;
Wu, Yueni
;
Feng, Kai
;
Deng, Ye
;
Tan, Lin
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Submit date:2020/10/23
Long-term experiment
Fertilization treatment
Microbial community
Soil properties
Network analysis
ARGA, a pipeline for primer evaluation on antibiotic resistance genes
期刊论文
ENVIRONMENT INTERNATIONAL, 2019, 卷号: 128, 页码: 137-145
Authors:
Wei, Ziyan
;
Wu, Yueni
;
Feng, Kai
;
Yang, Min
;
Zhang, Yu
;
Tu, Qichao
;
Wang, Jun
;
Deng, Ye
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Submit date:2020/10/23
Sequence database
ARGs
Protein
Nucleotide
Primer assessment
Annotation
无权访问的条目
学位论文
Authors:
吴悦妮
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Submit date:2021/07/08